I followed Jupyter notebook for reading fastmri dataset. I read file1000010.h5 from knee_singlecoil_train dataset. The ismrmrd_header within dataset shows the number of receiver channels as 15.
But the size of kspace data is (36, 640, 368) ie. (number of slices, height, width). So is it a single channel or multi channel data?
If multi channel, how can i get data from individual channels?
Hello, although the data is compressed to a single channel, the headers are unaltered from the original multicoil data, which in this case had 15 channels.
For getting data from individual channels from multicoil data, just apply
hf = h5py.File(‘file1000010.h5’)
kdata = hf[‘kspace’][()][:, 0]
This will return a (36, 640, 368) array of k-space data from the first coil. If you want the second coil, replace 0 with 1.